Computational Systems Biology


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BrukerBuster  v.1.0

BrukerBuster help you copy a directory tree generated by Bruker into a layout more suitable for reading.Please Note: this software is a Java Web Start Application, you need to right-click on the download file and choose "Launch".Requirements: * Java

Mz2mgf  v.1.3.5

Converts mzData files to MGF. mz2mgf can convert any mzData files to MGF. It can also convert BioTools xml files too. mz2mgf is a variation for Josh: Convert MS mzxml files to simple "RT m/z Intensity" TAB separated lines.Requirements: * JavaPlease





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Mz2tsv  v.1.3.5

Java tool to convert mzxml files to TAB lines. mz2tsv can convert MS mzxml files to simple "RT m/z Intensity" TAB separated lines. It is very useful if you want to convert a lot of mzxml with ease.Requirements: * Java

RatioDiff  v.1.0.3

The Significance of the Difference Between Two Independent Proportions. Compute p-values with just a click. RatioDiff compute p-values. Just drag and drop your Excel spreadsheet file onto the logo.

IdAlign  v.1.0.0

Perform targeted and non-targeted metabolite profiling analysis. IDAlgin can align metabolite peaks by their identifications, thus overcome retention time shifting caused misalignment. GC/MS data is first processed using AMDIS (Automated mass

Atmatch  v.1.0 Beta

Atmatch matches At numbers from Mascot with peptide fragments from GeneSpring.Requirements: *

DAMBE (Data Analysis and Molecular Biology and Evolution)  v.5.2.30

DAMBE (Data Analysis and Molecular Biology and Evolution) help you with data analysis and molecular biology and evolution.Here is a short summary of DAMBE functions 1. Sequence alignment * General sequence alignment with nucleotide and amino acid

BioTapestry  v.5.0.2

BioTapestry is designed around the concept of a developmental network model, and is intended to deal with large scale models with consistency and clarity. It is capable of representing systems that exhibit increasing complexity over time,

DyNet  v.1.1

Dynamic network visualization made easy. dyNet is a Java program for dynamic network visualization, manipulation and clustering. Results can be exported in a variety of formats.dyNet Features: 1. dynamic network visualization 2. network manipulation

Multifactor Dimensionality Reduction  v.2.0 Beta 8.4

Data mining made easy. The objective of Multifactor Dimensionality Reduction is to make available an open-source version of our Multifactor Dimensionality Reduction (MDR) software.

TinkerCell  v.1.2.926

Computer-Aided Design in Synthetic Biology. TinkerCell is a Computer-Aided Design (CAD) tool for synthetic biology. Since synthetic biology is a rapidly evolving field,

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